Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_00570 | Not Available | Positive | 114094 - 114933 | 28903.8 |
| succinate-semialdehyde dehydrogenase | DV20_00575 | Not Available | Negative | 116953 - 118314 | 48472.1 |
| hypothetical protein | DV20_00580 | Not Available | Positive | 118557 - 118928 | 13426.3 |
| alpha/beta hydrolase | DV20_00585 | Not Available | Negative | 118915 - 119745 | 29582.3 |
| tetr family transcriptional regulator | DV20_00590 | Not Available | Negative | 119810 - 120433 | 22810.3 |
| hypothetical protein | DV20_00595 | Not Available | Negative | 120455 - 122029 | 54641.9 |
| hypothetical protein | DV20_00600 | Not Available | Negative | 122029 - 122346 | 11213.2 |
| hypothetical protein | DV20_00605 | Not Available | Negative | 122340 - 122846 | 17592.4 |
| type i restriction endonuclease subunit m | DV20_00610 | Not Available | Negative | 123043 - 123612 | 21641.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 124361 - 124752 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.