Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_05840 | Not Available | Positive | 1149482 - 1149757 | 9785.57 |
| tetr family transcriptional regulator | DV20_05845 | Not Available | Negative | 1149754 - 1150413 | 23518.0 |
| fad-dependent oxidoreductase | DV20_05850 | Not Available | Positive | 1150528 - 1151718 | 42136.3 |
| abc transporter substrate-binding protein | DV20_05855 | Not Available | Positive | 1151835 - 1152758 | 32272.8 |
| thioesterase | DV20_05860 | Not Available | Negative | 1152755 - 1153162 | 13894.6 |
| marr family transcriptional regulator | DV20_05865 | Not Available | Positive | 1153227 - 1153649 | 15261.5 |
| merr family transcriptional regulator | DV20_05870 | Not Available | Negative | 1153654 - 1154385 | 26486.4 |
| proteasome protein | DV20_05875 | Not Available | Negative | 1154385 - 1155302 | 33596.3 |
| membrane protein | DV20_05880 | Not Available | Positive | 1155476 - 1155985 | 18682.7 |
| hypothetical protein | DV20_05885 | Not Available | Positive | 1156000 - 1157517 | 54665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.