Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DV20_05790 | Not Available | Positive | 1133815 - 1135035 | 44089.4 |
| nudix hydrolase | DV20_05795 | Not Available | Positive | 1135041 - 1135514 | 17491.3 |
| hypothetical protein | DV20_05800 | Not Available | Positive | 1135969 - 1136442 | 17280.6 |
| hypothetical protein | DV20_05805 | Not Available | Positive | 1136449 - 1137264 | 29885.2 |
| hypothetical protein | DV20_05810 | Not Available | Negative | 1137577 - 1137825 | 8508.31 |
| hypothetical protein | DV20_05815 | Not Available | Positive | 1138755 - 1141133 | 84957.6 |
| hypothetical protein | DV20_05820 | Not Available | Negative | 1141685 - 1141936 | 8950.72 |
| transcriptional regulator | DV20_05825 | Not Available | Negative | 1146404 - 1147024 | 22178.6 |
| nadph:quinone reductase | DV20_05830 | Not Available | Positive | 1147107 - 1148075 | 32059.2 |
| pectate lyase | DV20_05835 | Not Available | Positive | 1148218 - 1149378 | 40309.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.