Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | DV20_05585 | Not Available | Negative | 1102915 - 1104225 | 45190.8 |
| diaminopimelate decarboxylase | DV20_05590 | Not Available | Negative | 1104232 - 1105662 | 51108.6 |
| arginyl-trna synthetase | DV20_05595 | Not Available | Negative | 1105666 - 1107336 | 59916.9 |
| hypothetical protein | DV20_05600 | Not Available | Positive | 1107533 - 1108348 | 28520.6 |
| hypothetical protein | DV20_05605 | Not Available | Positive | 1108345 - 1109061 | 25566.9 |
| hypothetical protein | DV20_05610 | Not Available | Negative | 1109075 - 1109407 | 11316.2 |
| cation transporter | DV20_05615 | Not Available | Negative | 1109437 - 1110357 | 31657.9 |
| epoxide hydrolase | DV20_05620 | Not Available | Negative | 1110526 - 1111626 | 40834.9 |
| Trna-arg | Not Available | Not Available | Positive | 1111777 - 1111852 | Not Available |
| hypothetical protein | DV20_05630 | Not Available | Negative | 1112000 - 1113430 | 53232.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.