Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DV20_05530 | Not Available | Positive | 1092771 - 1093775 | 37333.3 |
| sugar translocase | DV20_05535 | Not Available | Positive | 1093772 - 1094206 | 15606.3 |
| hypothetical protein | DV20_05540 | Not Available | Positive | 1094199 - 1095464 | 46893.8 |
| glyoxalase | DV20_05545 | Not Available | Positive | 1095476 - 1095850 | 13542.9 |
| transposase | DV20_05550 | Not Available | Positive | 1095961 - 1096248 | 10964.0 |
| peptide chain release factor 1 | DV20_05560 | Not Available | Negative | 1097001 - 1098071 | 39137.6 |
| 50s ribosomal protein l31 | DV20_05565 | Not Available | Negative | 1098152 - 1098379 | 8398.96 |
| transcription termination factor rho | DV20_05570 | Not Available | Negative | 1098562 - 1100562 | 72253.5 |
| serine kinase | DV20_05575 | Not Available | Negative | 1100973 - 1101860 | 29980.9 |
| threonine synthase | DV20_05580 | Not Available | Negative | 1101857 - 1102918 | 36468.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.