Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | DV20_05170 | Not Available | Negative | 1028961 - 1030079 | 38543.2 |
| asnc family transcriptional regulator | DV20_05175 | Not Available | Positive | 1030138 - 1030614 | 17144.7 |
| hypothetical protein | DV20_05180 | Not Available | Negative | 1030617 - 1031141 | 19966.0 |
| asnc family transcriptional regulator | DV20_05185 | Not Available | Negative | 1031125 - 1031589 | 17201.6 |
| f420-dependent oxidoreductase | DV20_05190 | Not Available | Positive | 1031683 - 1032522 | 30346.5 |
| cytidine deaminase | DV20_05195 | Not Available | Positive | 1032519 - 1032947 | 15645.5 |
| methyltransferase | DV20_05200 | Not Available | Positive | 1032944 - 1033354 | 14470.0 |
| 3-hydroxybutyryl-coa dehydrogenase | DV20_05205 | Not Available | Negative | 1033355 - 1035124 | 62144.2 |
| pts sugar transporter subunit iia | DV20_05210 | Not Available | Negative | 1035244 - 1035915 | 22368.3 |
| dihydroxyacetone kinase | DV20_05215 | Not Available | Negative | 1035912 - 1036541 | 20504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.