Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase | DV20_05120 | Not Available | Negative | 1019507 - 1020286 | 27782.1 |
| phosphoserine phosphatase | DV20_05125 | Not Available | Negative | 1020283 - 1021512 | 43034.8 |
| cytochrome c oxidase subunit 1 | DV20_05130 | Not Available | Negative | 1021628 - 1023415 | 66499.4 |
| hypothetical protein | DV20_05135 | Not Available | Positive | 1023551 - 1024375 | 29943.8 |
| alpha/beta hydrolase | DV20_05140 | Not Available | Negative | 1024363 - 1025124 | 27183.6 |
| acetyltransferase | DV20_05145 | Not Available | Positive | 1025123 - 1025662 | 20204.1 |
| hypothetical protein | DV20_05150 | Not Available | Negative | 1025697 - 1026002 | 11554.5 |
| nad/nadp octopine/nopaline dehydrogenase | DV20_05155 | Not Available | Negative | 1026297 - 1027397 | 38717.9 |
| phosphodiesterase | DV20_05160 | Not Available | Negative | 1027582 - 1028706 | 39163.7 |
| fmdb family transcriptional regulator | DV20_05165 | Not Available | Positive | 1028752 - 1028964 | 6784.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.