Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DV20_05065 | Not Available | Negative | 1011282 - 1011839 | 20405.0 |
| clp protease clps | DV20_05070 | Not Available | Negative | 1011836 - 1012135 | 10947.9 |
| nicotinate phosphoribosyltransferase | DV20_05075 | Not Available | Positive | 1012210 - 1013511 | 45872.4 |
| amidase | DV20_05080 | Not Available | Positive | 1013526 - 1014104 | 19594.8 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | DV20_05085 | Not Available | Positive | 1014101 - 1014745 | 21453.9 |
| hypothetical protein | DV20_05090 | Not Available | Negative | 1014800 - 1015417 | 20461.2 |
| biotin biosynthesis protein bioy | DV20_05095 | Not Available | Positive | 1015629 - 1016216 | 19399.0 |
| atp-dependent helicase | DV20_05100 | Not Available | Positive | 1016352 - 1018400 | 73131.3 |
| hypothetical protein | DV20_05105 | Not Available | Positive | 1018459 - 1018800 | 12202.0 |
| osmotically inducible protein c | DV20_05115 | Not Available | Negative | 1019089 - 1019490 | 14276.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.