Thermincola carboxydiphila

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Thermincolaceae

Genus

Thermincola

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyThermincolaceae
GenusThermincola
SpeciesThermincola carboxydiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermincola ferriacetica strain Z-0001 Tfer_ctg78, whole genome

Gene Summary

Adenine Count

862896 bp

Thymine Count

863082 bp

Guanine Count

734454 bp

Cytosine Count

717641 bp

Genome Length

3178727 bp

Protein-coding Genes

3097 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bilirubin oxidaseTfer_0948P07788Positive887604 - 88917559393.7
exsb proteinTfer_0949Q24VU8Positive889342 - 89001924797.9
hypothetical proteinTfer_0950Not AvailablePositive890045 - 89072825617.8
cold-shock proteinTfer_0952P41016Positive890966 - 8911637241.46
hypothetical proteinTfer_0954Not AvailableNegative891531 - 8916203083.76
thioesterase superfamily proteinTfer_0955O84540Negative891613 - 89212218877.9
hypothetical proteinTfer_0956Not AvailablePositive892410 - 8925595711.97
hypothetical proteinTfer_0957Not AvailableNegative892659 - 8928567091.01
hypothetical proteinTfer_0958Not AvailableNegative892898 - 89335317302.1
phospholipase c precursorTfer_0959Not AvailableNegative893384 - 89409727358.1

Displaying genes 971 – 980 of 3187 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

159 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 159 metabolites

Health Effects

No health effects information available for this bacterium.