Thermincola carboxydiphila

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Thermincolaceae

Genus

Thermincola

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyThermincolaceae
GenusThermincola
SpeciesThermincola carboxydiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermincola ferriacetica strain Z-0001 Tfer_ctg78, whole genome

Gene Summary

Adenine Count

862896 bp

Thymine Count

863082 bp

Guanine Count

734454 bp

Cytosine Count

717641 bp

Genome Length

3178727 bp

Protein-coding Genes

3097 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-basal body complex subunit flieTfer_0569Q9X186Negative534055 - 53435411277.6
flagellar basal-body rod protein flgcTfer_0570Q57466Negative534366 - 53480316022.2
flagellar basal-body rod protein flgbTfer_0571P52608Negative534811 - 53522715352.5
gtp-sensing pleiotropic transcriptional repressor codyTfer_0573B1II67Negative535664 - 53644629063.2
heat shock protein hslvu, atpase subunit hsluTfer_0574A5D2W8Negative536493 - 53789652897.0
atp-dependent proteaseTfer_0575A5D2W7Negative537962 - 53850419332.4
tyrosine recombinase xercTfer_0576A5D2W6Negative538520 - 53942834934.5
hypothetical proteinTfer_0577B7GGC8Negative539486 - 54079348243.3
dna topoisomerase iTfer_0578Q9KA23Negative540806 - 54290579797.2
transcriptional regulator, marr familyTfer_0579P73345Negative543011 - 54409039330.7

Displaying genes 601 – 610 of 3187 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

159 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 159 metabolites

Health Effects

No health effects information available for this bacterium.