Collimonas pratensis str. Ter291

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas pratensis
StrainTer291

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas pratensis strain Ter291 chromosome, complete genome.

Gene Summary

Adenine Count

1144445 bp

Thymine Count

1146050 bp

Guanine Count

1648144 bp

Cytosine Count

1647260 bp

Genome Length

5585899 bp

Protein-coding Genes

4910 genes

Non-Coding Genes

196 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tim-barrel domain-containing proteinCPter291_RS03730Q9F234Negative828320 - 83079193283.5
mfs transporterCPter291_RS03735P0AA79Negative830814 - 83209146697.4
smp-30/gluconolactonase/lre family proteinCPter291_RS03740Not AvailableNegative832214 - 83310432087.9
glucarate dehydrataseCPter291_RS03745P42206Negative833196 - 83454549075.8
laci family dna-binding transcriptional regulatorCPter291_RS03750Not AvailableNegative834702 - 83577537263.1
deor/glpr family dna-binding transcription regulatorCPter291_RS03755Q51391Positive835948 - 83674229470.4
glycerol-3-phosphate dehydrogenaseCPter291_RS03760P52111Positive837109 - 83865657171.6
glycerol kinase glpkCPter291_RS03765B2SYH7Positive838751 - 84024753888.3
mip/aquaporin family proteinCPter291_RS03770Q9X1E3Positive840342 - 84105524314.3
glutathione peroxidaseCPter291_RS03775P74250Negative841120 - 84162018184.5

Displaying genes 951 – 960 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

290 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 290 metabolites

Health Effects

No health effects information available for this bacterium.