Collimonas arenae str. Cal35

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas arenae
StrainCal35

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas arenae strain Cal35 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

10301 bp

Thymine Count

10196 bp

Guanine Count

10010 bp

Cytosine Count

10933 bp

Genome Length

41440 bp

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein pilpLT85_RS02250Not AvailablePositive521416 - 52196420262.7
type iv pilus secretin pilqLT85_RS02255Not AvailablePositive522033 - 52415374190.9
bifunctional shikimate kinase/3-dehydroquinate synthase arokbLT85_RS02260Not AvailablePositive524191 - 52595464434.9
deoxyguanosinetriphosphate triphosphohydrolaseLT85_RS02265Not AvailablePositive525951 - 52709943493.7
duf4197 domain-containing proteinLT85_RS02270Not AvailablePositive527194 - 52788323941.1
ribosome hibernation-promoting factor, hpf/yfia familyLT85_RS02275Not AvailableNegative528122 - 52847213487.3
rna polymerase factor sigma-54LT85_RS02280Not AvailableNegative528636 - 53011754931.7
lps export abc transporter atp-binding proteinLT85_RS02285Not AvailableNegative530228 - 53097427348.2
lipopolysaccharide transport periplasmic protein lptaLT85_RS02290Not AvailableNegative530971 - 53151619973.7
lps export abc transporter periplasmic protein lptcLT85_RS02295Not AvailableNegative531572 - 53218923453.3

Displaying genes 631 – 640 of 5088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.