Collimonas arenae str. Cal35

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas arenae
StrainCal35

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas arenae strain Cal35 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

10301 bp

Thymine Count

10196 bp

Guanine Count

10010 bp

Cytosine Count

10933 bp

Genome Length

41440 bp

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb3 family type iv secretion system proteinLT85_RS24955Not AvailableNegative18366 - 1866511004.9
trbc/virb2 family proteinLT85_RS24960Not AvailableNegative18662 - 1902713169.3
hypothetical proteinLT85_RS24965Not AvailableNegative19116 - 1944511988.0
trna 2-selenouridine(34) synthase mnmhLT85_RS24970Not AvailablePositive19590 - 2069042140.1
fatty acid desaturaseLT85_RS24975Not AvailableNegative20754 - 2187242026.7
helix-turn-helix transcriptional regulatorLT85_RS25725Not AvailableNegative21928 - 2267427964.2
hypothetical proteinLT85_RS26850Not AvailableNegative22795 - 2306410201.9
replication/maintenance protein replLT85_RS24990Not AvailablePositive24307 - 2485520521.6
hypothetical proteinLT85_RS24995Not AvailablePositive24905 - 2551623340.8
hypothetical proteinLT85_RS25000Not AvailableNegative25994 - 261555370.37

Displaying genes 21 – 30 of 5088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.