Thermoplasma acidophilum DSM 1728

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Methanobacteriati

Phylum

Thermoplasmatota

Class

Thermoplasmata

Order

Thermoplasmatales

Family

Thermoplasmataceae

Genus

Thermoplasma

Description

A thermoacidophilic archaeon, Thermoplasma is a fascinating microorganism whose study can give new insight into how extremophiles can live in such conditions missing some of the generic cell structure that other thermophilic's have. Protease and chaperone assemblies from Thermoplasma have helped illuminate the structure and function of their more complex eukaryotic homologues.The T. acidophilum genome consists of a single circular chromosome of 1,564,906 bp. No plasmids were detected through biochemical methods or DNA sequencing, but a 15.2kbp has previously been reported in other isolates. The genome for T. volcanium is composed of 1,584,804 bp. There has been apparent lateral gene transfer between T. acidophilum and Sulfolobus solfataricus mainly including protein degradation pathways and various transport proteins. These two microorganisms are phylogenetically distant with S. sulfolobus being a crenarchaeon, but they do share the same living environment. While Thermoplasma may share around 252 open reading frames (17%) with Sulfolobus, but surprisingly, no homologues of the genes that mediate sulphur respiration in Archaeoglobus (a fellow archaeon) were found. Instead, homologues of genes that mediate dissimilatory sulphur reduction in Salmonella typhimurium were present. Thermoplasma also contain proteins not present in other archaeal genome including Hta, an archaeal DNA-binding protein that is closely related to bacterial proteins and appear to substitute functionally for the missing histones.Thermoplasma live in extreme environments without a protective outer layer (S-layer, cell wall) and survive with only a plasma membrane. Not to mention they retain a near neutral cytoplasm. They have flagella and are motile, although it is unclear what structure can function as the stator for flagellar rotation. Thermoplasma can metabolize like Sulfolobus through glucose degradation which eventually leads to the TCA cycle. Thermoplasma contain several respiratory chain proteins such as electron transfer flavoproteins and cytochrome b homologues. They are also able to gain energy anaerobically, however, by sulfur respiration.Environments that have characteristics including a pH level between 0.5 - 4.0 with temperatures ranging from 55-60oC are where you can find Thermophiles. Optimum growth conditions are about pH 2 and 60oC. Strands have been isolated from self-heating coal refuse piles and solfatara fields. (From http://microbewiki.kenyon.edu/index.php/Thermoplasma) (MicrobeWiki: Thermoplasma)

Taxonomy

KingdomMethanobacteriati
PhylumThermoplasmatota
ClassThermoplasmata
OrderThermoplasmatales
FamilyThermoplasmataceae
GenusThermoplasma
SpeciesThermoplasma acidophilum
StrainDSM 1728

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Thermoplasma acidophilum DSM 1728
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature59
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Thermoplasma acidophilum DSM 1728, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
winged helix-turn-helix transcriptional regulatorTA_RS01655Not AvailableNegative341351 - 34166511857.5
endonuclease iii domain-containing proteinTA_RS01660Not AvailableNegative341652 - 34231425158.2
translation initiation factor if-2 subunit gammaTA_RS01665Not AvailableNegative342319 - 34355444861.4
30s ribosomal protein s6eTA_RS01670Not AvailableNegative343538 - 34392414033.1
bifunctional n(6)-l-threonylcarbamoyladenine synthase/serine/threonine protein kinaseTA_RS01675Not AvailablePositive344065 - 34565458205.9
xtp/ditp diphosphataseTA_RS01680Not AvailablePositive345647 - 34621021340.4
fad-dependent oxidoreductaseTA_RS01685Not AvailablePositive346400 - 34768646630.6
ferredoxin family proteinTA_RS01690Not AvailablePositive347697 - 34796910035.0
electron transfer flavoprotein subunit beta/fixa family proteinTA_RS01695Not AvailablePositive347976 - 34877028529.6
electron transfer flavoprotein subunit alpha/fixb family proteinTA_RS01700Not AvailablePositive348770 - 34982238204.5

Displaying genes 341 – 350 of 1602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.