Rickettsia sibirica 246

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia sibirica
Strain246

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Rickettsia sibirica 246 chromosome, whole genome shotgun sequence.

Gene Summary

Adenine Count

421693 bp

Thymine Count

422453 bp

Guanine Count

201176 bp

Cytosine Count

204698 bp

Genome Length

1250021 bp

Protein-coding Genes

1407 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (adenosine(37)-n6)-dimethylallyltransferase miaaRSIB_RS05330Q92HW4Positive37400 - 3849141582.4
hypothetical proteinRSIB_RS09515Q9ZD36Negative38684 - 4041962362.3
pentapeptide repeat-containing proteinRSIB_RS05320Not AvailableNegative40581 - 43430107735.0
ribonucleotide-diphosphate reductase subunit betaRSIB_RS05315Q91FE8Negative43579 - 4456538329.8
pd-(d/e)xk nuclease family transposaseRSIB_RS09300Not AvailableNegative44957 - 4535214855.1
ribonucleoside-diphosphate reductase subunit alphaRSIB_RS05305Q196Z5Negative45426 - 4724968465.6
chitin-binding proteinRSIB_RS05535Not AvailableNegative47666 - 4792010177.3
hypothetical proteinRSIB_RS10335Not AvailableNegative47976 - 4829311923.0
spore coat u domain-containing proteinRSIB_RS05300Not AvailableNegative48441 - 4893817653.2
fimbria/pilus outer membrane usher proteinRSIB_RS05295Not AvailableNegative49256 - 494928684.56

Displaying genes 41 – 50 of 1447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002655octadecanoyl-CoAC39H66N7O17P3SChemical structure of octadecanoyl-CoANot available
Average1029.97Da
Monoisotopic1029.347070181Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.