Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent hydrogenase/sulfhydrogenase 1 subunit delta | PAB_RS04625 | Not Available | Negative | 824893 - 825678 | 29397.8 |
| nadph-dependent hydrogenase/sulfhydrogenase 1 subunit gamma | PAB_RS04630 | Not Available | Negative | 825689 - 826567 | 33077.3 |
| nadph-dependent hydrogenase/sulfhydrogenase 1 subunit beta | PAB_RS04635 | Not Available | Negative | 826564 - 827667 | 43232.8 |
| m20/m25/m40 family metallo-hydrolase | PAB_RS04640 | Not Available | Positive | 827888 - 829195 | 48735.8 |
| mfs transporter | PAB_RS04645 | Not Available | Positive | 829241 - 830410 | 44980.0 |
| leucine--trna ligase | PAB_RS04650 | Not Available | Negative | 830400 - 833303 | 113830.0 |
| hypothetical protein | PAB_RS04655 | Not Available | Positive | 833575 - 833814 | 9112.0 |
| antitoxin family protein | PAB_RS04660 | Not Available | Positive | 834096 - 834308 | 8010.02 |
| hypothetical protein | PAB_RS09995 | Not Available | Positive | 834293 - 834436 | 5582.74 |
| pin domain-containing protein | PAB_RS04665 | Not Available | Positive | 834420 - 834710 | 11309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
