Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl ornithine aminotransferase family protein | PAB_RS03905 | Not Available | Positive | 684804 - 686168 | 50670.3 |
| hypothetical protein | PAB_RS09675 | Not Available | Negative | 686220 - 688742 | 95723.5 |
| hypothetical protein | PAB_RS03915 | Not Available | Negative | 688768 - 689142 | 14425.0 |
| phosphoglycolate phosphatase | PAB_RS03920 | Not Available | Negative | 689321 - 690022 | 25786.3 |
| prenyltransferase/squalene oxidase repeat-containing protein | PAB_RS03925 | Not Available | Positive | 690235 - 691089 | 32346.0 |
| hypothetical protein | PAB_RS03930 | Not Available | Positive | 691089 - 691424 | 13557.2 |
| hypothetical protein | PAB_RS03935 | Not Available | Positive | 691378 - 691773 | 15677.9 |
| trna (guanine(37)-n1)-methyltransferase trm5b | PAB_RS03940 | Not Available | Positive | 691805 - 692797 | 37854.4 |
| flap endonuclease-1 | PAB_RS03945 | Not Available | Negative | 692781 - 693812 | 38951.5 |
| Ncrna_class:snorna | Not Available | Not Available | Positive | 693820 - 693877 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
