Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf835 domain-containing protein | PAB_RS03220 | Not Available | Positive | 572437 - 573537 | 41216.6 |
| act domain-containing protein | PAB_RS03225 | Not Available | Negative | 573534 - 574034 | 18913.4 |
| archaeal proteasome endopeptidase complex subunit alpha | PAB_RS03230 | Not Available | Positive | 574193 - 574975 | 28995.8 |
| ribosome assembly factor sbds | PAB_RS03235 | Not Available | Positive | 575003 - 575713 | 27064.0 |
| exosome complex rna-binding protein rrp4 | PAB_RS03240 | Not Available | Positive | 575710 - 576507 | 29316.9 |
| exosome complex exonuclease rrp41 | PAB_RS03245 | Not Available | Positive | 576482 - 577231 | 27679.9 |
| exosome complex protein rrp42 | PAB_RS03250 | Not Available | Positive | 577224 - 578048 | 29953.4 |
| Trna-thr | Not Available | Not Available | Positive | 578139 - 578215 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 578219 - 578296 | Not Available |
| hypothetical protein | PAB_RS03265 | Not Available | Positive | 578401 - 579030 | 24235.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
