Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | PAB_RS02385 | Not Available | Positive | 431017 - 432015 | 36952.6 |
| 3-dehydroquinate dehydratase | PAB_RS02390 | Not Available | Positive | 432012 - 432659 | 24511.8 |
| shikimate dehydrogenase | PAB_RS02395 | Not Available | Positive | 432656 - 433450 | 28992.5 |
| shikimate kinase | PAB_RS02400 | Not Available | Positive | 433428 - 434252 | 29320.5 |
| bmp family protein | PAB_RS02405 | Not Available | Positive | 434296 - 435510 | 44704.2 |
| abc transporter atp-binding protein | PAB_RS02410 | Not Available | Positive | 435555 - 437051 | 55225.2 |
| abc transporter permease | PAB_RS02415 | Not Available | Positive | 437044 - 438033 | 35224.1 |
| abc transporter permease | PAB_RS02420 | Not Available | Positive | 438030 - 438938 | 32132.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PAB_RS02425 | Not Available | Positive | 438991 - 440199 | 43619.4 |
| chorismate synthase | PAB_RS02430 | Not Available | Positive | 440189 - 441259 | 39292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
