Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PAB_RS01660 | Not Available | Positive | 318434 - 319012 | 21646.7 |
| fad-dependent oxidoreductase | PAB_RS01665 | Not Available | Positive | 319073 - 320509 | 52141.3 |
| 4fe-4s dicluster domain-containing protein | PAB_RS01670 | Not Available | Positive | 320506 - 321012 | 18899.4 |
| (2fe-2s)-binding protein | PAB_RS01675 | Not Available | Positive | 321009 - 321275 | 9899.33 |
| nad(p)/fad-dependent oxidoreductase | PAB_RS01680 | Not Available | Positive | 321272 - 322411 | 42630.0 |
| emc3/tmco1 family protein | PAB_RS01685 | Not Available | Negative | 322408 - 322935 | 21095.3 |
| adenylate kinase | PAB_RS01690 | Not Available | Negative | 322928 - 323518 | 22287.4 |
| preprotein translocase subunit secy | PAB_RS01695 | Not Available | Negative | 323583 - 324989 | 52160.2 |
| ul15m family ribosomal protein | PAB_RS01700 | Not Available | Negative | 325038 - 325481 | 16322.0 |
| 50s ribosomal protein l30 | PAB_RS01705 | Not Available | Negative | 325493 - 325960 | 17711.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
