Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | PAB_RS06300 | Not Available | Positive | 1132557 - 1133615 | 39423.7 |
| dtdp-glucose 4,6-dehydratase | PAB_RS06305 | Not Available | Positive | 1133627 - 1134628 | 38736.4 |
| antitoxin family protein | PAB_RS09845 | Not Available | Positive | 1134659 - 1134793 | 5178.6 |
| duf2281 domain-containing protein | PAB_RS06310 | Not Available | Positive | 1135061 - 1135264 | 8196.95 |
| pin domain-containing protein | PAB_RS06315 | Not Available | Positive | 1135265 - 1135666 | 15309.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PAB_RS06320 | Not Available | Positive | 1135723 - 1136280 | 21591.1 |
| antitoxin af2212-like protein | PAB_RS06325 | Not Available | Positive | 1136320 - 1136534 | 8210.15 |
| hypothetical protein | PAB_RS06330 | Not Available | Positive | 1136757 - 1136954 | 7484.12 |
| type ii toxin-antitoxin system vapc family toxin | PAB_RS06335 | Not Available | Positive | 1136935 - 1137423 | 18350.2 |
| dtdp-4-dehydrorhamnose reductase | PAB_RS06340 | Not Available | Positive | 1137420 - 1138271 | 32171.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
