Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
486862 bp
Thymine Count
489003 bp
Guanine Count
393280 bp
Cytosine Count
395973 bp
Genome Length
1765118 bp
Protein-coding Genes
1916 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class iv adenylate cyclase | PAB_RS05165 | Not Available | Positive | 930645 - 931157 | 19971.1 |
| tyrosine--trna ligase | PAB_RS05170 | Not Available | Negative | 931129 - 932256 | 43056.6 |
| ferritin family protein | PAB_RS05175 | Not Available | Negative | 932262 - 932843 | 22957.7 |
| rna-binding domain-containing protein | PAB_RS05180 | Not Available | Positive | 932936 - 933343 | 15655.2 |
| tata-box-binding protein | PAB_RS05185 | Not Available | Negative | 933344 - 933919 | 21411.0 |
| dephospho-coa kinase | PAB_RS05190 | Not Available | Negative | 933980 - 934543 | 21225.2 |
| proline--trna ligase | PAB_RS05195 | Not Available | Negative | 934567 - 936009 | 56374.9 |
| lipopolysaccharide biosynthesis protein | PAB_RS05200 | Not Available | Positive | 936089 - 937384 | 47125.7 |
| metallophosphoesterase family protein | PAB_RS05205 | Not Available | Negative | 937350 - 938108 | 28479.6 |
| dead/deah box helicase | PAB_RS05210 | Not Available | Negative | 938160 - 940778 | 101206.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
