Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | METD_RS03730 | Not Available | Positive | 769112 - 769825 | 23938.7 |
| cog4223 family protein | METD_RS03735 | Not Available | Positive | 769966 - 772272 | 75622.6 |
| heme biosynthesis protein hemy | METD_RS03740 | Not Available | Positive | 772390 - 773925 | 53955.4 |
| Trna-ser | Not Available | Not Available | Positive | 774084 - 774173 | Not Available |
| tyrosine-type recombinase/integrase | METD_RS03750 | Not Available | Positive | 774701 - 775594 | 33058.1 |
| lysr family transcriptional regulator | METD_RS03755 | Not Available | Negative | 775756 - 776652 | 32573.0 |
| nadph-dependent f420 reductase | METD_RS03760 | Not Available | Positive | 776769 - 777404 | 21914.3 |
| zinc-dependent alcohol dehydrogenase family protein | METD_RS03765 | Not Available | Positive | 777506 - 778495 | 35089.7 |
| is5-like element ismex15 family transposase | METD_RS28640 | Not Available | Positive | 778718 - 779472 | 27727.5 |
| vape domain-containing protein | METD_RS03780 | Not Available | Positive | 780311 - 781843 | 58138.7 |
Pathways
1364 pathways
Health Effects
No health effects information available for this bacterium.
