Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation c-type cytochrome soxa | METD_RS03420 | Not Available | Negative | 709644 - 710486 | 30564.3 |
| thiosulfate oxidation carrier complex protein soxz | METD_RS03425 | Not Available | Negative | 710674 - 711003 | 12047.5 |
| thiosulfate oxidation carrier protein soxy | METD_RS03430 | Not Available | Negative | 711045 - 711503 | 16017.3 |
| sulfur oxidation c-type cytochrome soxx | METD_RS03435 | Not Available | Negative | 711521 - 711997 | 16665.1 |
| thioredoxin family protein | METD_RS03440 | Not Available | Negative | 712166 - 712741 | 21895.2 |
| hypothetical protein | METD_RS28325 | Not Available | Positive | 712820 - 713560 | 26761.1 |
| cytochrome c biogenesis ccda family protein | METD_RS03450 | Not Available | Negative | 713604 - 714338 | 25659.2 |
| regulatory protein soxs | METD_RS03455 | Not Available | Positive | 714435 - 714779 | 12860.8 |
| arsr/smtb family transcription factor | METD_RS03460 | Not Available | Positive | 714835 - 715191 | 13085.8 |
| glcg/hbps family heme-binding protein | METD_RS03465 | Not Available | Negative | 715285 - 715779 | 16784.1 |
Pathways
1364 pathways
Health Effects
No health effects information available for this bacterium.
