Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | METD_RS23840 | Not Available | Negative | 5147058 - 5148473 | 50183.7 |
| dmt family transporter | METD_RS23845 | Not Available | Positive | 5148595 - 5149482 | 30087.6 |
| response regulator | METD_RS23850 | Not Available | Negative | 5149495 - 5150229 | 25742.4 |
| gnat family n-acetyltransferase | METD_RS23855 | Not Available | Negative | 5150355 - 5150885 | 18864.8 |
| duf983 domain-containing protein | METD_RS23860 | Not Available | Positive | 5151073 - 5151516 | 16029.4 |
| l-lactate permease | METD_RS23865 | Not Available | Negative | 5151588 - 5153327 | 61450.4 |
| manganese catalase family protein | METD_RS23870 | Not Available | Positive | 5153700 - 5154623 | 33596.7 |
| phytoene/squalene synthase family protein | METD_RS23875 | Not Available | Negative | 5154687 - 5155583 | 32489.8 |
| mth938-like domain-containing protein | METD_RS23880 | Not Available | Negative | 5155717 - 5156112 | 13749.7 |
| protein translocase subunit secf | METD_RS23885 | Not Available | Negative | 5156237 - 5157181 | 34284.2 |
Pathways
1364 pathways
Health Effects
No health effects information available for this bacterium.
