Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase family protein | METD_RS22215 | Not Available | Positive | 4786987 - 4787958 | 33809.4 |
| bifunctional nicotinamidase/pyrazinamidase | METD_RS22220 | Not Available | Positive | 4788143 - 4788769 | 22227.5 |
| aminotransferase class iv | METD_RS22225 | Not Available | Negative | 4788939 - 4789796 | 29344.6 |
| anthranilate synthase component ii | METD_RS22230 | Not Available | Negative | 4789783 - 4790412 | 22489.9 |
| aminodeoxychorismate synthase component i | METD_RS22235 | Not Available | Negative | 4790409 - 4791809 | 50192.8 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | METD_RS22240 | Not Available | Positive | 4792102 - 4792365 | 9246.25 |
| type ii toxin-antitoxin system yafq family toxin | METD_RS22245 | Not Available | Positive | 4792352 - 4792633 | 10664.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | METD_RS22250 | Not Available | Positive | 4792750 - 4794096 | 49486.4 |
| hypothetical protein | METD_RS22255 | Not Available | Positive | 4794193 - 4794378 | 6219.87 |
| doxx family protein | METD_RS22260 | Not Available | Positive | 4794385 - 4794807 | 15567.4 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
