Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | METD_RS21675 | Not Available | Negative | 4666233 - 4667141 | 32649.1 |
| aldo/keto reductase family oxidoreductase | METD_RS21680 | Not Available | Positive | 4667236 - 4668117 | 30996.1 |
| sensor domain-containing diguanylate cyclase | METD_RS21685 | Not Available | Positive | 4668567 - 4670018 | 53420.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | METD_RS21690 | Not Available | Negative | 4670373 - 4672169 | 65748.2 |
| hypothetical protein | METD_RS21695 | Not Available | Negative | 4672542 - 4672850 | 10980.2 |
| substrate-binding domain-containing protein | METD_RS21700 | Not Available | Positive | 4673061 - 4674110 | 37193.8 |
| hypothetical protein | METD_RS21705 | Not Available | Positive | 4674642 - 4675706 | 37283.1 |
| taxi family trap transporter solute-binding subunit | METD_RS21710 | Not Available | Positive | 4675752 - 4676855 | 40623.3 |
| hypothetical protein | METD_RS29590 | Not Available | Negative | 4676968 - 4677591 | 20631.8 |
| hypothetical protein | METD_RS31120 | Not Available | Positive | 4677944 - 4678261 | 11579.0 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
