Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | METD_RS21515 | Not Available | Negative | 4627824 - 4628657 | 27403.2 |
| ybjn domain-containing protein | METD_RS21520 | Not Available | Negative | 4628739 - 4629245 | 19268.9 |
| accessory factor ubik family protein | METD_RS21525 | Not Available | Negative | 4629704 - 4629985 | 9976.76 |
| response regulator | METD_RS21530 | Not Available | Positive | 4630228 - 4630953 | 26794.5 |
| atp-binding protein | METD_RS21535 | Not Available | Positive | 4630950 - 4632428 | 52145.9 |
| ggdef domain-containing protein | METD_RS21540 | Not Available | Positive | 4632629 - 4633801 | 43120.2 |
| glutathione s-transferase family protein | METD_RS21545 | Not Available | Negative | 4633930 - 4634586 | 24150.9 |
| polyhydroxyalkanoate depolymerase | METD_RS21550 | Not Available | Positive | 4634937 - 4636151 | 45377.4 |
| 30s ribosomal protein s21 | METD_RS21555 | Not Available | Positive | 4636586 - 4636903 | 11667.4 |
| response regulator | METD_RS21560 | Not Available | Negative | 4637002 - 4637391 | 13989.7 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
