Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | METD_RS21470 | Not Available | Negative | 4615946 - 4616467 | 19356.8 |
| iuca/iucc family protein | METD_RS21475 | Not Available | Positive | 4617348 - 4619132 | 65330.1 |
| iuca/iucc family protein | METD_RS21480 | Not Available | Positive | 4619116 - 4622097 | 107663.0 |
| duf6005 family protein | METD_RS21485 | Not Available | Positive | 4622094 - 4623401 | 49129.3 |
| sugar phosphate isomerase/epimerase family protein | METD_RS21490 | Not Available | Positive | 4623398 - 4624234 | 30165.8 |
| duf2218 domain-containing protein | METD_RS21495 | Not Available | Positive | 4624263 - 4624541 | 10437.3 |
| gnat family n-acetyltransferase | METD_RS21500 | Not Available | Positive | 4624830 - 4625330 | 18650.2 |
| duf4142 domain-containing protein | METD_RS21505 | Not Available | Positive | 4625498 - 4626175 | 22889.7 |
| hypothetical protein | METD_RS30715 | Not Available | Positive | 4626351 - 4626608 | 9357.25 |
| hypothetical protein | METD_RS21510 | Not Available | Negative | 4626980 - 4627753 | 27902.3 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
