Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit gamma | METD_RS21370 | Not Available | Positive | 4590085 - 4590675 | 20355.3 |
| l-serine ammonia-lyase | METD_RS21375 | Not Available | Positive | 4590818 - 4592179 | 47943.5 |
| duf1127 domain-containing protein | METD_RS21380 | Not Available | Positive | 4592609 - 4592830 | 7921.63 |
| prolyl-trna synthetase associated domain-containing protein | METD_RS21385 | Not Available | Negative | 4592837 - 4593346 | 18109.9 |
| electron transfer flavoprotein subunit beta | METD_RS21390 | Not Available | Negative | 4593360 - 4594154 | 26900.7 |
| electron transfer flavoprotein subunit alpha/fixb family protein | METD_RS21395 | Not Available | Negative | 4594151 - 4595371 | 41999.4 |
| duf3483 domain-containing protein | METD_RS21400 | Not Available | Negative | 4595368 - 4597269 | 67451.0 |
| nadh:flavin oxidoreductase | METD_RS21405 | Not Available | Negative | 4597557 - 4599599 | 73699.2 |
| hybrid-cluster nad(p)-dependent oxidoreductase | METD_RS21410 | Not Available | Negative | 4599662 - 4600789 | 40558.4 |
| aromatic ring-hydroxylating oxygenase subunit alpha | METD_RS21415 | Not Available | Negative | 4600793 - 4602052 | 47227.0 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
