Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val family dehydrogenase | METD_RS20350 | Not Available | Positive | 4389103 - 4390365 | 45707.8 |
| pseudouridine synthase | METD_RS29525 | Not Available | Positive | 4390376 - 4391338 | 34970.2 |
| hypothetical protein | METD_RS20360 | Not Available | Positive | 4391335 - 4391871 | 18532.9 |
| hypothetical protein | METD_RS20365 | Not Available | Negative | 4392347 - 4392646 | 10461.1 |
| hpp family protein | METD_RS20370 | Not Available | Positive | 4392854 - 4393993 | 39466.5 |
| cystathionine gamma-synthase | METD_RS20375 | Not Available | Negative | 4394623 - 4395786 | 40115.2 |
| rrf2 family transcriptional regulator | METD_RS20380 | Not Available | Negative | 4396017 - 4396493 | 16871.5 |
| no-inducible flavohemoprotein | METD_RS20385 | Not Available | Positive | 4396589 - 4397830 | 45184.6 |
| pas domain-containing protein | METD_RS20390 | Not Available | Positive | 4397885 - 4398328 | 16048.2 |
| 5-formyltetrahydrofolate cyclo-ligase | METD_RS20395 | Not Available | Positive | 4398346 - 4399140 | 29342.0 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
