Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | METD_RS20305 | Not Available | Negative | 4375348 - 4376082 | 27676.1 |
| grea/greb family elongation factor | METD_RS20310 | Not Available | Positive | 4377495 - 4377944 | 16331.8 |
| universal stress protein | METD_RS20315 | Not Available | Positive | 4378192 - 4379121 | 33198.2 |
| hypothetical protein | METD_RS31110 | Not Available | Positive | 4379232 - 4379390 | 5518.02 |
| eal domain-containing protein | METD_RS28435 | Not Available | Negative | 4379652 - 4382420 | 99442.6 |
| nucleoside diphosphate kinase regulator | METD_RS20330 | Not Available | Negative | 4383179 - 4383592 | 14748.7 |
| grea/greb family elongation factor | METD_RS29520 | Not Available | Positive | 4384484 - 4384969 | 17332.6 |
| homospermidine synthase | METD_RS20335 | Not Available | Positive | 4385032 - 4386468 | 53178.6 |
| hydroxysqualene dehydroxylase hpne | METD_RS20340 | Not Available | Positive | 4386476 - 4387735 | 45709.9 |
| phosphoserine transaminase | METD_RS20345 | Not Available | Positive | 4387819 - 4388976 | 41616.9 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
