Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | METD_RS20020 | Not Available | Positive | 4322308 - 4324023 | 60423.4 |
| urease accessory protein ureg | METD_RS20025 | Not Available | Positive | 4324026 - 4324643 | 22158.8 |
| urease accessory protein ured | METD_RS20030 | Not Available | Positive | 4324640 - 4325485 | 29963.2 |
| urease accessory protein uree | METD_RS20035 | Not Available | Positive | 4325495 - 4325980 | 17377.9 |
| urease accessory protein uref | METD_RS20040 | Not Available | Positive | 4325970 - 4326677 | 24796.8 |
| antar domain-containing response regulator | METD_RS20045 | Not Available | Negative | 4326683 - 4327279 | 21898.7 |
| transporter substrate-binding domain-containing protein | METD_RS20050 | Not Available | Negative | 4327289 - 4328410 | 40233.7 |
| abc transporter substrate-binding protein | METD_RS20055 | Not Available | Positive | 4328512 - 4330068 | 57825.3 |
| is21-like element ismdi7 family transposase | METD_RS20060 | Not Available | Positive | 4330840 - 4332339 | 55525.5 |
| is21-like element ismdi7 family helper atpase istb | METD_RS20065 | Not Available | Positive | 4332336 - 4333178 | 31143.6 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
