Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110-like element ismex17 family transposase | METD_RS19970 | Not Available | Negative | 4311280 - 4312209 | 33648.0 |
| zinc-dependent alcohol dehydrogenase family protein | METD_RS19975 | Not Available | Negative | 4313006 - 4313998 | 35125.0 |
| nadph-dependent f420 reductase | METD_RS19980 | Not Available | Negative | 4314034 - 4314810 | 27166.6 |
| winged helix-turn-helix transcriptional regulator | METD_RS19985 | Not Available | Positive | 4314886 - 4315272 | 14264.6 |
| nitrilase family protein | METD_RS19990 | Not Available | Positive | 4316050 - 4316916 | 31142.0 |
| substrate-binding protein | METD_RS19995 | Not Available | Positive | 4316974 - 4318131 | 40330.4 |
| branched-chain amino acid abc transporter permease | METD_RS20000 | Not Available | Positive | 4318210 - 4319046 | 28392.8 |
| abc transporter permease subunit | METD_RS20005 | Not Available | Positive | 4319039 - 4320892 | 65276.4 |
| abc transporter atp-binding protein | METD_RS20010 | Not Available | Positive | 4320889 - 4321602 | 25243.0 |
| urease subunit beta | METD_RS20015 | Not Available | Positive | 4321614 - 4322306 | 25518.4 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
