Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter substrate-binding protein | METD_RS19125 | Not Available | Positive | 4144752 - 4145726 | 34129.1 |
| aliphatic sulfonate abc transporter substrate-binding protein | METD_RS19130 | Not Available | Positive | 4145829 - 4146791 | 34060.9 |
| fad/nad(p)-binding protein | METD_RS19135 | Not Available | Positive | 4146826 - 4148208 | 48910.0 |
| hypothetical protein | METD_RS19140 | Not Available | Positive | 4148543 - 4148752 | 7338.37 |
| duf2147 domain-containing protein | METD_RS19145 | Not Available | Positive | 4148992 - 4149669 | 23547.9 |
| putative zinc-binding metallopeptidase | METD_RS19150 | Not Available | Negative | 4149785 - 4150945 | 43575.6 |
| duf2126 domain-containing protein | METD_RS19155 | Not Available | Positive | 4151126 - 4154476 | 123205.0 |
| circularly permuted type 2 atp-grasp protein | METD_RS19160 | Not Available | Positive | 4154473 - 4157013 | 90772.4 |
| transglutaminase family protein | METD_RS19165 | Not Available | Positive | 4157010 - 4157912 | 32561.7 |
| tetr/acrr family transcriptional regulator | METD_RS19170 | Not Available | Negative | 4157926 - 4158480 | 19271.1 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
