Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtc | METD_RS18975 | Not Available | Negative | 4110293 - 4111474 | 42701.1 |
| urea abc transporter permease subunit urtb | METD_RS18980 | Not Available | Negative | 4111488 - 4112414 | 32990.3 |
| urea abc transporter substrate-binding protein | METD_RS18985 | Not Available | Negative | 4112524 - 4113777 | 45408.6 |
| atp-binding protein | METD_RS18990 | Not Available | Positive | 4114271 - 4117450 | 113398.0 |
| dna-binding response regulator | METD_RS18995 | Not Available | Positive | 4117443 - 4118351 | 31872.6 |
| invasion associated locus b family protein | METD_RS19000 | Not Available | Positive | 4118870 - 4119673 | 27862.6 |
| precorrin-6a synthase (deacetylating) | METD_RS19005 | Not Available | Positive | 4120224 - 4120982 | 28003.6 |
| hypothetical protein | METD_RS19010 | Not Available | Positive | 4121231 - 4122544 | 45376.3 |
| hypothetical protein | METD_RS19015 | Not Available | Negative | 4122564 - 4123130 | 19978.8 |
| para family protein | METD_RS19020 | Not Available | Positive | 4123491 - 4124180 | 24888.8 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
