Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | METD_RS18930 | Not Available | Positive | 4100473 - 4101174 | 25792.9 |
| amidase family protein | METD_RS18935 | Not Available | Positive | 4101228 - 4102637 | 48626.2 |
| hypothetical protein | METD_RS31520 | Not Available | Negative | 4102755 - 4102916 | 5998.28 |
| aliphatic amidase | METD_RS18940 | Not Available | Negative | 4103175 - 4104227 | 39036.6 |
| carbohydrate porin | METD_RS18945 | Not Available | Negative | 4104303 - 4105763 | 52719.0 |
| fmdb family zinc ribbon protein | METD_RS18950 | Not Available | Negative | 4105930 - 4106247 | 11206.3 |
| formamidase | METD_RS18955 | Not Available | Negative | 4106312 - 4107541 | 44560.0 |
| alpha/beta fold hydrolase | METD_RS18960 | Not Available | Negative | 4107705 - 4108721 | 37503.6 |
| urea abc transporter atp-binding subunit urte | METD_RS18965 | Not Available | Negative | 4108733 - 4109422 | 24673.2 |
| urea abc transporter atp-binding protein urtd | METD_RS18970 | Not Available | Negative | 4109493 - 4110281 | 28964.0 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
