Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | METD_RS10560 | Not Available | Negative | 2308346 - 2309734 | 49583.5 |
| isopenicillin n synthase family dioxygenase | METD_RS10565 | Not Available | Negative | 2309736 - 2310707 | 35170.8 |
| abc transporter substrate-binding protein | METD_RS10570 | Not Available | Negative | 2310720 - 2311688 | 34987.2 |
| aromatic ring-hydroxylating oxygenase subunit alpha | METD_RS10575 | Not Available | Negative | 2311688 - 2312761 | 40916.9 |
| abc transporter permease | METD_RS10580 | Not Available | Negative | 2312828 - 2313622 | 28306.7 |
| abc transporter atp-binding protein | METD_RS10585 | Not Available | Negative | 2313619 - 2314557 | 33442.2 |
| abc transporter substrate-binding protein | METD_RS10590 | Not Available | Negative | 2314566 - 2315552 | 35779.1 |
| lysr family transcriptional regulator | METD_RS10595 | Not Available | Positive | 2315879 - 2316784 | 33031.4 |
| cytosine deaminase | METD_RS10600 | Not Available | Positive | 2316864 - 2318243 | 48447.9 |
| hypothetical protein | METD_RS10605 | Not Available | Positive | 2318538 - 2318786 | 8117.67 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
