Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | METD_RS10170 | Not Available | Positive | 2202221 - 2202952 | 26462.6 |
| malate dehydrogenase | METD_RS10175 | Not Available | Positive | 2203303 - 2204265 | 33678.7 |
| adp-forming succinate--coa ligase subunit beta | METD_RS10180 | Not Available | Positive | 2204343 - 2205539 | 41959.7 |
| succinate--coa ligase subunit alpha | METD_RS10185 | Not Available | Positive | 2205548 - 2206435 | 30160.6 |
| 2-oxoglutarate dehydrogenase e1 component | METD_RS10190 | Not Available | Positive | 2206660 - 2209650 | 111504.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | METD_RS10195 | Not Available | Positive | 2209734 - 2211074 | 47234.2 |
| dihydrolipoyl dehydrogenase | METD_RS10200 | Not Available | Positive | 2211363 - 2212766 | 48996.0 |
| hybrid sensor histidine kinase/response regulator | METD_RS10205 | Not Available | Positive | 2212966 - 2214591 | 58993.5 |
| hypothetical protein | METD_RS10210 | Not Available | Positive | 2214650 - 2215282 | 23306.3 |
| sarcosine oxidase subunit gamma | METD_RS10215 | Not Available | Negative | 2215264 - 2215893 | 22030.0 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
