Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | METD_RS10120 | Not Available | Negative | 2189939 - 2190757 | 28266.0 |
| succinyl-diaminopimelate desuccinylase | METD_RS10125 | Not Available | Positive | 2191032 - 2192198 | 41146.6 |
| trna pseudouridine(38-40) synthase trua | METD_RS10130 | Not Available | Negative | 2192359 - 2193111 | 27856.4 |
| methionyl-trna formyltransferase | METD_RS10135 | Not Available | Negative | 2193125 - 2194054 | 32205.1 |
| peptide deformylase | METD_RS10140 | Not Available | Negative | 2194065 - 2194580 | 19264.3 |
| glycosyltransferase family 87 protein | METD_RS10145 | Not Available | Negative | 2194836 - 2196122 | 44894.9 |
| recombination mediator recr | METD_RS10150 | Not Available | Negative | 2196237 - 2196842 | 21584.2 |
| phosphoenolpyruvate carboxykinase | METD_RS10155 | Not Available | Positive | 2197170 - 2198789 | 58729.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | METD_RS10160 | Not Available | Negative | 2198836 - 2200113 | 46521.1 |
| 3-dehydroquinate synthase | METD_RS29185 | Not Available | Negative | 2200230 - 2201969 | 61529.1 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
