Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | METD_RS09825 | Not Available | Negative | 2124829 - 2125209 | 13126.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | METD_RS09830 | Not Available | Negative | 2125266 - 2126108 | 29389.1 |
| crp/fnr family transcriptional regulator | METD_RS09835 | Not Available | Negative | 2126271 - 2126738 | 16700.3 |
| response regulator transcription factor | METD_RS09840 | Not Available | Negative | 2126925 - 2127611 | 25434.5 |
| l,d-transpeptidase family protein | METD_RS09845 | Not Available | Positive | 2127902 - 2128495 | 21517.2 |
| yggs family pyridoxal phosphate-dependent enzyme | METD_RS09850 | Not Available | Negative | 2128535 - 2129278 | 26689.9 |
| leucine--trna ligase | METD_RS09855 | Not Available | Positive | 2129587 - 2132214 | 97326.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | METD_RS09860 | Not Available | Positive | 2132305 - 2133639 | 46031.9 |
| pas domain-containing protein | METD_RS09865 | Not Available | Negative | 2133653 - 2134675 | 37423.8 |
| duf6894 family protein | METD_RS09870 | Not Available | Positive | 2135043 - 2135309 | 9489.08 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
