Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | METD_RS09425 | Not Available | Positive | 2042177 - 2042626 | 15683.8 |
| protoporphyrinogen oxidase hemj | METD_RS09430 | Not Available | Positive | 2042619 - 2043059 | 16773.2 |
| lysozyme inhibitor lpri family protein | METD_RS09435 | Not Available | Positive | 2043146 - 2043487 | 12261.8 |
| atp phosphoribosyltransferase | METD_RS09440 | Not Available | Negative | 2043636 - 2044613 | 34385.4 |
| atp phosphoribosyltransferase regulatory subunit | METD_RS09445 | Not Available | Negative | 2044610 - 2045788 | 40939.5 |
| tigr01459 family had-type hydrolase | METD_RS09450 | Not Available | Negative | 2045933 - 2046820 | 32432.8 |
| tetr/acrr family transcriptional regulator | METD_RS09455 | Not Available | Negative | 2046941 - 2047567 | 22201.8 |
| acyl-[acp]--phospholipid o-acyltransferase | METD_RS09460 | Not Available | Positive | 2047759 - 2051175 | 121159.0 |
| type ii toxin-antitoxin system rele/pare family toxin | METD_RS09465 | Not Available | Positive | 2051320 - 2051721 | 15169.1 |
| helix-turn-helix domain-containing protein | METD_RS09470 | Not Available | Positive | 2051705 - 2052028 | 11958.6 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
