Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | METD_RS07550 | Not Available | Negative | 1615856 - 1616941 | 37932.6 |
| acyl-coa dehydrogenase family protein | METD_RS07555 | Not Available | Positive | 1617479 - 1618624 | 40357.3 |
| llm class flavin-dependent oxidoreductase | METD_RS07560 | Not Available | Positive | 1618643 - 1619740 | 39430.7 |
| abc transporter substrate-binding protein | METD_RS07565 | Not Available | Positive | 1619740 - 1620681 | 33107.8 |
| cupin domain-containing protein | METD_RS07570 | Not Available | Positive | 1620708 - 1621250 | 19943.1 |
| plp-dependent transferase | METD_RS29075 | Not Available | Positive | 1621433 - 1621708 | 9485.15 |
| hypothetical protein | METD_RS07575 | Not Available | Positive | 1621900 - 1622103 | 7500.07 |
| serine o-acetyltransferase | METD_RS07580 | Not Available | Positive | 1622189 - 1623034 | 30093.1 |
| family 2b encapsulin nanocompartment shell protein | METD_RS31720 | Not Available | Positive | 1623455 - 1624846 | 50274.9 |
| family 2a encapsulin nanocompartment cargo protein cysteine desulfurase | METD_RS07590 | Not Available | Positive | 1624833 - 1626857 | 70726.8 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
