Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | AM1 DM4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Medicago truncatula |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter atp-binding protein azta | METD_RS06585 | Not Available | Positive | 1388685 - 1389596 | 32575.6 |
| metal abc transporter permease | METD_RS06590 | Not Available | Positive | 1389593 - 1390480 | 30540.8 |
| dna polymerase iii subunit alpha | METD_RS06595 | Not Available | Positive | 1391116 - 1394637 | 128930.0 |
| lytic transglycosylase domain-containing protein | METD_RS06600 | Not Available | Positive | 1394959 - 1395744 | 26993.1 |
| gamma-glutamylcyclotransferase | METD_RS06605 | Not Available | Negative | 1395860 - 1396555 | 25785.9 |
| hypothetical protein | METD_RS06610 | Not Available | Negative | 1396800 - 1397192 | 13766.6 |
| dna repair protein reco | METD_RS06615 | Not Available | Positive | 1397321 - 1398061 | 26888.3 |
| dna topoisomerase iv subunit a | METD_RS06620 | Not Available | Positive | 1398183 - 1400429 | 82489.7 |
| translation initiation factor if-1 | METD_RS06625 | Not Available | Negative | 1400507 - 1400782 | 10597.9 |
| branched-chain amino acid abc transporter substrate-binding protein | METD_RS06630 | Not Available | Negative | 1401100 - 1402212 | 37762.3 |
Pathways
1233 pathways
Health Effects
No health effects information available for this bacterium.
