Listeria innocua Clip11262

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Listeriaceae

Genus

Listeria

Description

Listeria are mainly soil bacteria, though as a pathogen they are food-borne. They are intracellular pathogens that use actin filaments within the host cell for their motility. L. monocytogenes is the causative agent of listeriosis.The genomes of both Listeria monocytogenes and Listeria innocua have been sequenced. The genome of Listeria monocytogenes is 2,944,528 bp long with 2853 open reading frames and a G+C content of 39%. The genome of Listeria innocua is 3,011,209 bp long with 2973 open reading frames and a G+C content of 37%. Surprisingly, many encoded proteins are similar to those of the soil bacterium Bacillus subtilis. L. monocytogenes has a single circular chromosome, while L. innocua contains an additional plasmid of 81,905 bp.The ability of Listeria to inhabit a wide range of environments coincides with the presence of 331 genes encoding different transport proteins, comprising 11.6% of the total gene compliment of L. monocytogenes. Listeria also has an extensive regulatory repertoire occupying 7.3% of the total genome.Listeria are non spore-forming, nonbranching, Gram-positive rods that occur individually or form short chains. Listeria are able to produce adenosine triphosphate thorugh a complete respiratory chain, and have several fermentation pathways. This coincides with their lifestyle as microaerophilic, facultative anaerobes. Listeria are intecellular pathogens that use host-produced actin filaments for motility within the host cell. The bacteria propel themselves through the cytoplasm of an infected cell using a tail composed of actin.Listeria colonies are small, smooth and blueish-gray. Their optimum growth temperature is between 30 and 37 degrees Celsius, but growth can occur at temperatures as low as 4 degrees Celsius, but the generation time is longer. Listeria is widely distributed throughout the environment, inhabiting soil, decaying vegetable matter, sewage, water, animal feed, fresh and frozen poultry, processed meats, raw milk, cheese, and humans. But primary habitats are considered to be soil and decaying vegetable matter, living as a saprophyte. Listeria can also survive in many extreme conditions that it encounters during its lifespan, such as high salt concentrations, high pH, and high temperature. Both pathogenic and innocuous forms of listeria have this ability. Listeria spp. also form biofilms, which allow them to attach to solid surfaces where they proliferate and become extremely difficult to remove.Listeria monocytogenes is the etiological agent of listeriosis. L. monocytogenes is a food-borne pathogen, which, as mentioned earlier, can survive normal refrigeration processes. It can cause severe disease in immunocompromised individuals, and pregnant women. Listeria is an intracellular pathogen where they co-opt the cell's machinery, and travel through the blood stream, once they make it through the gastrointestinal tract. After ingestion of contaminated food, Listeria migrates from the intestinal lumen to the central nervous system, and the fetoplacental unit. The clinical manifestations of listeriosis include meningitis, meningoencephalitis, septicemia, abortion, perinatal infection, and gastroenteritis. Listeria is capable of infecting macrophages, which aquire the pathogen through phagocytosis, or epithelial cells, which are infected when listeria induces cytoskeletal changes and plasma membrane extensions. (From http://microbewiki.kenyon.edu/index.php/Listeria) (MicrobeWiki: Listeria)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyListeriaceae
GenusListeria
SpeciesListeria innocua
StrainClip11262

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Listeria innocua Clip11262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Listeria innocua Clip11262, complete sequence.

Gene Summary

Adenine Count

941651 bp

Thymine Count

942192 bp

Guanine Count

559189 bp

Cytosine Count

568176 bp

Genome Length

3011208 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

435 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:otherNot AvailableNot AvailablePositive1550791 - 1550986Not Available
replication-associated recombination protein aLIN_RS07890O34528Negative1551057 - 155234046985.6
cysteine metabolism transcriptional regulator cymrLIN_RS07895O34527Positive1552490 - 155291215600.8
ammonium transporterLIN_RS07900Q07429Positive1553157 - 155436243022.0
p-ii family nitrogen regulatorLIN_RS07905Q07428Positive1554376 - 155474113306.4
hypothetical proteinLIN_RS07910Not AvailablePositive1554891 - 155527114182.6
aspartate--trna ligaseLIN_RS07915Q92BJ4Negative1555307 - 155708266378.2
histidine--trna ligaseLIN_RS07920Q92BJ3Negative1557084 - 155836148440.0
n-acetylmuramoyl-l-alanine amidaseLIN_RS07925O32041Positive1558803 - 156008646163.6
d-aminoacyl-trna deacylaseLIN_RS07930Q92BJ1Negative1560135 - 156058716524.9

Displaying genes 1811 – 1820 of 3227 in total

Metabolites

262 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 262 metabolites

Health Effects

No health effects information available for this bacterium.