Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium aquaticum |
| Strain | DSM 16371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water; hydroponic culture of a moss; phyllosphere; plant surfaces; soil |
| Biotic relationship | Not Available |
| Host(s) | Niphotrichum japonicum, Lemna |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1124089 bp
Thymine Count
1111339 bp
Guanine Count
2599836 bp
Cytosine Count
2590067 bp
Genome Length
7425331 bp
Protein-coding Genes
6247 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimp | VP06_03685 | B8IEB0 | Positive | 857119 - 857736 | 22205.1 |
| transcription elongation factor nusa | VP06_03690 | Q92HF4 | Positive | 857786 - 859495 | 62518.2 |
| dna-binding protein | VP06_03695 | Not Available | Positive | 859522 - 860301 | 26983.9 |
| translation initiation factor if-2 | VP06_03700 | B1ZDQ8 | Positive | 860416 - 863490 | 108937.0 |
| ribosome-binding factor a | VP06_03705 | B8IEB4 | Positive | 863659 - 864066 | 15308.3 |
| pseudouridine synthase | VP06_03710 | P60345 | Positive | 864285 - 865340 | 37630.0 |
| thioesterase | VP06_03715 | Not Available | Positive | 865362 - 865787 | 15417.3 |
| abc transporter substrate-binding protein | VP06_03725 | Not Available | Positive | 866107 - 867618 | 54877.9 |
| peptide abc transporter | VP06_03730 | Not Available | Positive | 868112 - 869056 | 32823.3 |
| peptide abc transporter permease | VP06_03735 | Not Available | Positive | 869053 - 869901 | 29174.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
