Rhodospirillum rubrum ATCC 11170

Gram-negativeSpirillaMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodospirillaceae

Genus

Rhodospirillum

Description

Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) is a Gram-negative, motile and spiral-shaped bacterium. It is able to grow under a broad range of conditions including aerobiosis and anaerobiosis. It can use fermentation or photosynthesis for producing energy when it grows anaerobically. It is able to grow on CO as sole source of energy. Its nitrogen fixation system consists of both a Mo-Fe and a Fe-only nitrogenases. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodospirillaceae
GenusRhodospirillum
SpeciesRhodospirillum rubrum
StrainATCC 11170

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourcePhotolithotroph - Photoautotroph
PathogenicityNo

Genome Summary

Rhodospirillum rubrum ATCC 11170

Accession NumberNC_007641.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleotidyltransferase family proteinRRU_RS19670Not Available-13409 - 1369910427.6
recombinase family proteinRRU_RS19675Not Available+13862 - 140265930.15
recombinase family proteinRRU_RS19680Not Available-14096 - 1530144481.8
tyrosine-type recombinase/integraseRRU_RS19685Not Available+15288 - 1609130096.6
lysr family transcriptional regulatorRRU_RS19690Not Available+16441 - 1734632796.6
ycze/yyas/yitt family proteinRRU_RS19695Not Available+17434 - 1811124121.6
o-methyltransferaseRRU_RS19700Not Available+18229 - 1891824622.1
mfs transporterRRU_RS19705Not Available+18918 - 2046552453.1
recombinase family proteinRRU_RS19710Not Available-21078 - 2171723039.6
duf4158 domain-containing proteinRRU_RS19715Not Available+21900 - 2238517395.2

Displaying genes 11 – 20 of 47 in total

Pathways

25 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling pathway thumbnail
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Rubrum Metabolism pathway thumbnail
Rubrum Metabolism
Rubrum Metabolism
PHBV metabolism pathway thumbnail
PHBV metabolism
PHBV metabolism
Show All 25 Pathways

Metabolites

157 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da

Displaying 1–10 of 157 metabolites