Photobacterium frigidiphilum

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium frigidiphilum is a Gram-negative, rod-shaped bacterium that thrives optimally at temperatures around 16.0°C. This microbe exhibits a facultative aerobic or anaerobic lifestyle, allowing it to adapt to varying oxygen conditions in its environment. The Gram-negative nature of P. frigidiphilum suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of this group of bacteria. Its rod shape may confer advantages in motility and nutrient uptake, potentially facilitating its survival in diverse habitats. The optimal growth temperature of 16.0°C indicates that P. frigidiphilum is well-suited for cold environments, which may include marine or polar ecosystems where temperatures are consistently low. Its facultative metabolic capabilities imply that it can utilize both aerobic and anaerobic respiration, enabling it to thrive in environments where oxygen availability fluctuates. This adaptability not only underscores its potential role in nutrient cycling within its ecological niche but also suggests that P. frigidiphilum may play a significant part in the microbial communities of cold aquatic environments, contributing to the overall microbial diversity and functioning in these unique ecosystems. Understanding the traits of P. frigidiphilum may provide insights into the resilience and ecological roles of microorganisms in cold habitats, particularly in the context of climate change and its impact on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium frigidiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium frigidiphilum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium frigidiphilum strain JCM 12947 CFSAN065507_157,

Gene Summary

Adenine Count

1873058 bp

Thymine Count

1890150 bp

Guanine Count

1353602 bp

Cytosine Count

1329653 bp

Genome Length

6446463 bp

Protein-coding Genes

5624 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic hydrocarbon degradation proteinC9J12_01565Not AvailablePositive361881 - 36313145295.5
aromatic hydrocarbon degradation proteinC9J12_01570Not AvailablePositive363487 - 36477346340.4
abc transporterC9J12_01575Not AvailableNegative364887 - 36571130654.6
c-type cytochrome biogenesis protein ccmiC9J12_01580Not AvailableNegative365771 - 36704246585.0
cytochrome c-type biogenesis protein ccmhC9J12_01585Not AvailableNegative367039 - 36756619881.3
dsbe family thiol:disulfide interchange proteinC9J12_01590Not AvailableNegative367563 - 36811720652.2
heme lyase nrfefg subunit nrfeC9J12_01595Not AvailableNegative368110 - 37009873147.9
cytochrome c maturation protein ccmeC9J12_01600Not AvailableNegative370095 - 37058017701.5
heme exporter protein ccmdC9J12_01605Not AvailableNegative370577 - 3707837862.57
heme abc transporter permeaseC9J12_01610Not AvailableNegative370791 - 37152227253.9

Displaying genes 391 – 400 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.