Photobacterium frigidiphilum

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium frigidiphilum is a Gram-negative, rod-shaped bacterium that thrives optimally at temperatures around 16.0°C. This microbe exhibits a facultative aerobic or anaerobic lifestyle, allowing it to adapt to varying oxygen conditions in its environment. The Gram-negative nature of P. frigidiphilum suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of this group of bacteria. Its rod shape may confer advantages in motility and nutrient uptake, potentially facilitating its survival in diverse habitats. The optimal growth temperature of 16.0°C indicates that P. frigidiphilum is well-suited for cold environments, which may include marine or polar ecosystems where temperatures are consistently low. Its facultative metabolic capabilities imply that it can utilize both aerobic and anaerobic respiration, enabling it to thrive in environments where oxygen availability fluctuates. This adaptability not only underscores its potential role in nutrient cycling within its ecological niche but also suggests that P. frigidiphilum may play a significant part in the microbial communities of cold aquatic environments, contributing to the overall microbial diversity and functioning in these unique ecosystems. Understanding the traits of P. frigidiphilum may provide insights into the resilience and ecological roles of microorganisms in cold habitats, particularly in the context of climate change and its impact on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium frigidiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium frigidiphilum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium frigidiphilum strain JCM 12947 CFSAN065507_157,

Gene Summary

Adenine Count

1873058 bp

Thymine Count

1890150 bp

Guanine Count

1353602 bp

Cytosine Count

1329653 bp

Genome Length

6446463 bp

Protein-coding Genes

5624 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-dependent hydrolaseC9J12_00450Not AvailableNegative97112 - 9815238996.7
hypothetical proteinC9J12_00455Not AvailablePositive98432 - 9875512002.0
histidine kinaseC9J12_00460Not AvailablePositive98960 - 9941817028.5
inner membrane protein yhjdC9J12_00465Not AvailableNegative99500 - 10042033348.4
Ncrna_class:hammerhead_ribozymeNot AvailableNot AvailablePositive100564 - 100635Not Available
asma family proteinC9J12_00470Not AvailableNegative100693 - 10284676274.7
uridine kinaseC9J12_00475Not AvailableNegative103153 - 10379724285.6
iron-sulfur cluster carrier protein apbcC9J12_00480Not AvailableNegative103961 - 10503738595.0
methionine--trna ligaseC9J12_00485Not AvailablePositive105316 - 10735877066.8
dicarboxylate/amino acid:cation symporterC9J12_00490Not AvailablePositive107937 - 10925046116.7

Displaying genes 171 – 180 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.