Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. rhaphiolepidis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1148015 bp
Thymine Count
1137395 bp
Guanine Count
1590773 bp
Cytosine Count
1601768 bp
Genome Length
5483023 bp
Protein-coding Genes
5129 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box histidine kinase/response regulator | ALO48_00918 | Not Available | Positive | 698220 - 700844 | 94152.3 |
| hypothetical protein | ALO48_101425 | Not Available | Positive | 700863 - 700991 | 4188.27 |
| type iii effector locus protein | ALO48_100156 | Q98E66 | Negative | 701031 - 702026 | 37194.1 |
| hypothetical protein | ALO48_101954 | Not Available | Negative | 702041 - 702346 | 10998.1 |
| type iii effector hopaa1-1 | ALO48_00919 | Not Available | Positive | 702345 - 702914 | 20381.1 |
| type iii effector hopaa1-1 | ALO48_00920 | Not Available | Positive | 702931 - 703806 | 29808.4 |
| pectate-binding harpin | ALO48_00921 | D3JTC1 | Negative | 703893 - 705113 | 42345.2 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | ALO48_00922 | Not Available | Positive | 705417 - 705911 | 18188.6 |
| effector protein hopm1 | ALO48_101691 | Q887D0 | Positive | 705908 - 706093 | 6475.81 |
| avirulence protein avrf | ALO48_00923 | Not Available | Positive | 708220 - 708609 | 14339.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









